Publications 2019

Bradley P, den Bakker HC, Rocha EPC,  McVean G, Iqbal Z. 2019. Ultrafast search of all deposited bacterial and viral genomic data. Nature Biotechnol. 37:152–159.

Bugarel M, Cook PW, den Bakker HC, Harhay D, Nightingale KK, Loneragan GH. 2019.  Complete genome sequences of four Salmonella enterica strains (including those of serotypes Montevideo, Mbandaka, and Lubbock) isolated from peripheral lymph nodes of healthy cattle. Microbiol Resour Announc. 10;8 pii: e01450-18. doi: 10.1128/MRA.01450-18.

Deen B, Diez-Gonzalez, F. 2019. Assessment of Pediococcus acidilactici ATCC 8042 as potential Salmonella surrogate for thermal treatments of toasted oats cereal and peanut butter. Food Microbiol. 83:187-192. https://authors.elsevier.com/a/1Z8zw2eGSbVblL

Dev Kumar G, Macarisin D, Micallef SA. 2019. Salmonella enterica filamentation induced by pelargonic acid is a transient morphotype. Appl Environ Microbiol. 85(2). pii: e02191-18. doi: 10.1128/AEM.02191-18. 

Dev Kumar G , Ravishankar S. 2019. Ozonized water with plant antimicrobials: an effective method to inactivate Salmonella enterica on iceberg lettuce in the produce wash water. Environ. Res. 171:213-217.

Erickson MC, Liao, JY. 2019. Variation in recovery of Salmonella strains extracted from leafy greens. LWT-Food Sci. Tech.107:185-190. doi: 10.1016/j.lwt.2019.02.078

Erickson MC, Liao JY, Payton AS, Cook PW, Adhikari K, Wang S, Bautista J, Pérez JCD. 2019.  Efficacy of acetic acid or chitosan for reducing the prevalence of Salmonella- and Escherichia coli O157:H7-contaminated leafy green plants in field systems. J Food Prot. 82:854-861. doi: 10.4315/0362-028X.JFP-18-347.

Erickson MC, Liao JY. 2019. Exploratory study of the application of smoke aerosols to manure-based composting materials to reduce prevalence of Salmonella. J Food Prot.  82:804-809. doi: 10.4315/0362-028X.JFP-18-327.

Erickson MC, Liao JY, Payton AS, Cook PW, Bakker HCD, Bautista J, Díaz-Pérez JC. 2019. Survival of Salmonella enterica and Escherichia coli O157:H7 sprayed onto the foliage of field-grown cabbage plants. J Food Prot. 82:479-485. doi: 10.4315/0362-028X.JFP-18-326.

Erickson MC, Liao JY, Payton AS, Cook PW, Ortega YR. 2019. Survival and internalization of Salmonella and Escherichia coli O157:H7 sprayed onto different cabbage cultivars during cultivation in growth chambers. J Sci Food Agric. doi: 10.1002/jsfa.9573.

Erickson MC, Liao JY, Payton AS, Cook PW, Den Bakker HC, Bautista J, Pérez JCD. 2019. Pre-harvest internalization and surface survival of Salmonella and Escherichia coli O157:H7 sprayed onto different lettuce cultivars under field and growth chamber conditions. Int J Food Microbiol. 291:197-204.

Forghani F, den Bakker M, Liao J-Y, Payton AS, Futral AN, Diez-Gonzalez F. 2018. Salmonella and enterohemorrhagic Escherichia coli serogroups O45, O121, O145 in wheat flour: effects of long-term storage and thermal treatments. Front. Microbiol. https://doi.org/10.3389/fmicb.2019.00323.

Gadotti C, Forghani F, and Diez-Gonzalez F. 2020. Evaluation of single and combined antimicrobial treatments to inhibit Salmonella in queso fresco. Food Microbiol. 85: 103286 https://doi.org/10.1016/j.fm.2019.103286.

Guo Y, Wang Y, Wang X, Zhang L, Ortega Y, Feng Y. 2019. Mitochondrial genome sequence variation as a useful marker for assessing genetic heterogeneity among Cyclospora cayetanensis isolates and source-tracking. Parasit Vectors. 12:47. doi: 10.1186/s13071-019-3294-1.

Hyeon JY, Mann DA, Wang J, Kim WK, Deng X. 2019. Rapid detection of Salmonella in poultry environmental samples using real-time PCR coupled with immunomagnetic separation and whole genome amplification. Poult Sci. doi: 10.3382/ps/pez425.

Kirkland, C, Black E, Forghani F, Pomraning A, Sadowsky MJ, Diez-Gonzalez F. 2019. Room temperature growth of Salmonella enterica serovar Saintpaul in fresh Mexican salsa. J Food Prot. 82: 102-108.

Kim Y, Kim H, Beuchat LR, Ryu JH. 2019.  Inhibition of Listeria monocytogenes using biofilms of non-pathogenic soil bacteria (Streptomyces spp.) on stainless steel under desiccated condition. Food Microbiol. 79:61-65.

Lee S, Kim H, Beuchat LR, Ryu JH. 2019. Development of a decontamination method to inactivate Acidovorax citrulli on Cucurbitaceae seeds without loss of seed viability.  J Sci Food Agric. doi: 10.1002/jsfa.9841.

Sulaiman AAA, Kassem II. 2019. First report on the detection of the plasmid-borne colistin resistance gene mcr-1 in multi-drug resistant E. coli isolated from domestic and sewer waters in Syrian refugee camps in Lebanon. Travel Med Infect Dis. doi: 10.1016/j.tmaid.2019.06.014.

Zhang S, Li S, Gu W, den Bakker H, Boxrud D, Taylor A, Roe C, Driebe E, Engelthaler DM, Allard M, Brown E, McDermott P, Zhao S, Bruce BB, Trees E, Fields PI, Deng X. 2019. Zoonotic source attribution of Salmonella enterica serotype Typhimurium using genomic surveillance data, United States. Emerg Infect Dis. 25:82-91.

Zhao T, Dev Kumar G.  2019.  Acid based microbicides for the control of foodborne and clinical pathogens. Nov. Res. Sci. 1:1-3.

Zheng R, Zhao T, Wang Q.  2019.  Bactericidal effects of organic acids as sanitizing agent on iced storage shrimp. J. Nutr. Health Food Eng. 9:80-85.